Description
leucine rich repeat and Ig domain containing 1 [Source:HGNC Symbol;Acc:21205]
Gene Synonyms
FLJ14594, LERN1, LRRN6A, UNQ201
Location
Chromosome 15: 77,905,369-78,113,242 reverse strand.
GRCh37:CM000677.1
About this gene
This gene has 14 transcripts (splice variants), 14 paralogues and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000355300.6 | LINGO1-001 | 3055 | 620aa | ENSP00000347451.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45313 | H0YNK7 H3BM59 H3BMN3 H3BMW2 H3BN48 H3BQ49 Q96FE5 | NM_032808.5 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000561030.1 | LINGO1-002 | 2677 | 614aa | ENSP00000453853.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YNK7 H3BM59 H3BMN3 H3BMW2 H3BN48 H3BQ49 Q96FE5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000557798.1 | LINGO1-003 | 1035 | 326aa | ENSP00000453780.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YMX3 H0YNK7 H3BM59 H3BMN3 H3BMW2 H3BN48 H3BQ49 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000561686.1 | LINGO1-013 | 938 | 178aa | ENSP00000455605.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YNK7 H3BM59 H3BMN3 H3BMW2 H3BN48 H3BQ49 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000566711.1 | LINGO1-014 | 611 | 72aa | ENSP00000454687.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YNK7 H3BM59 H3BMW2 H3BN48 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000567726.1 | LINGO1-005 | 588 | 125aa | ENSP00000454465.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YNK7 H3BM59 H3BMN3 H3BMW2 H3BN48 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000570216.1 | LINGO1-008 | 571 | 18aa | ENSP00000454577.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BMW2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000562933.1 | LINGO1-010 | 567 | 11aa | ENSP00000456516.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000563316.1 | LINGO1-007 | 554 | 4aa | ENSP00000457101.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000559893.1 | LINGO1-004 | 552 | 55aa | ENSP00000454051.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YNK7 H3BM59 H3BMW2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000564472.1 | LINGO1-006 | 522 | 35aa | ENSP00000454245.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BM59 H3BMW2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000567605.1 | LINGO1-012 | 685 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000564066.1 | LINGO1-011 | 569 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000568951.1 | LINGO1-009 | 501 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
