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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TVP23A ENSG00000166676

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Description

trans-golgi network vesicle protein 23 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:20398]

Gene Synonyms

FAM18A, YDR084C

Location

Chromosome 16: 10,854,776-10,912,651 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 9 transcripts (splice variants), 172 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000299866.8	TVP23A-001	3360	213aa	ENSP00000299866.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45408	A6NH52 I3L3Y3	NM_001079512.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000572428.1	TVP23A-002	3256	150aa	ENSP00000460822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3Y3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000572102.1	TVP23A-003	2987	62aa	ENSP00000461067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L488	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000573360.1	TVP23A-004	3677	37aa	ENSP00000458488.1	Nonsense mediated decay		I3L109	-	-
ENST00000575135.1	TVP23A-006	1298	213aa	ENSP00000460567.1	Nonsense mediated decay	CCDS45408	A6NH52 I3L3Y3	-	-
ENST00000456096.2	TVP23A-008	1223	188aa	ENSP00000411972.2	Nonsense mediated decay		B7ZW18	-	-
ENST00000572980.1	TVP23A-007	1574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000573857.1	TVP23A-005	1269	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000570692.1	TVP23A-009	585	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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