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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CPSF2 ENSG00000165934

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Description

cleavage and polyadenylation specific factor 2, 100kDa [Source:HGNC Symbol;Acc:2325]

Gene Synonyms

CPSF100, KIAA1367

Location

Chromosome 14: 92,588,281-92,630,755 forward strand.

GRCh37:CM000676.1

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000298875.4	CPSF2-001	5301	782aa	ENSP00000298875.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9902	B3KN45 G3V3T7 Q9P2I0	NM_017437.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555244.1	CPSF2-007	806	269aa	ENSP00000451390.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000553427.1	CPSF2-004	715	80aa	ENSP00000451418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3T7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554290.1	CPSF2-005	558	62aa	ENSP00000452503.1	Nonsense mediated decay		G3V5T3	-	-
ENST00000556622.1	CPSF2-006	469	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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