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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NCSTN ENSG00000162736

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Description

nicastrin [Source:HGNC Symbol;Acc:17091]

Gene Synonyms

APH2, KIAA0253

Location

Chromosome 1: 160,313,062-160,328,742 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 17 transcripts (splice variants) and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000294785.5	NCSTN-001	2936	709aa	ENSP00000294785.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1203	E7ENA9 Q92542	NM_015331.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000368063.1	NCSTN-002	3031	689aa	ENSP00000357042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ENA9 Q92542	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000392212.4	NCSTN-202	2745	689aa	ENSP00000376047.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ENA9 Q92542	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000535857.1	NCSTN-203	1979	571aa	ENSP00000442605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6Y097 Q5T209	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000368065.4	NCSTN-201	1912	451aa	ENSP00000357044.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ENA9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000424645.1	NCSTN-008	958	319aa	ENSP00000388118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000435149.1	NCSTN-011	824	275aa	ENSP00000407849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000421914.1	NCSTN-006	776	255aa	ENSP00000390409.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T209	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000438008.1	NCSTN-003	702	232aa	ENSP00000389370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T210	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000424754.1	NCSTN-012	659	219aa	ENSP00000410124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T205	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000437169.1	NCSTN-007	448	134aa	ENSP00000415442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T211	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000459963.1	NCSTN-009	1246	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469159.1	NCSTN-013	856	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467837.1	NCSTN-004	726	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491390.1	NCSTN-014	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465223.1	NCSTN-010	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491332.1	NCSTN-005	490	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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