Description
nuclear RNA export factor 1 [Source:HGNC Symbol;Acc:8071]
Gene Synonyms
DKFZp667O0311, MEX67, Mex67, TAP
Location
Chromosome 11: 62,559,595-62,573,774 reverse strand.
GRCh37:CM000673.1
About this gene
This gene has 18 transcripts (splice variants) and 4 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000532297.1 | NXF1-001 | 2795 | 619aa | ENSP00000436679.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8037 | E9PLA7 E9PMV7 Q68CW9 Q9UBU9 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000531709.2 | NXF1-006 | 4128 | 356aa | ENSP00000453885.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44629 | B4E227 B4E3J0 E9PLA7 E9PMV7 Q59E96 Q9UBU9 | NM_001081491.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000294172.2 | NXF1-201 | 2346 | 619aa | ENSP00000294172.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8037 | E9PLA7 E9PMV7 Q68CW9 Q9UBU9 | NM_006362.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000530875.1 | NXF1-003 | 1922 | 603aa | ENSP00000435742.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PIN3 E9PLA7 E9PMV7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000439713.2 | NXF1-202 | 1144 | 356aa | ENSP00000408864.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44629 | B4E227 B4E3J0 E9PLA7 E9PMV7 Q59E96 Q9UBU9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000531131.1 | NXF1-004 | 1023 | 219aa | ENSP00000477375.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4E227 B4E3J0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000527902.1 | NXF1-013 | 619 | 124aa | ENSP00000434301.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000533671.1 | NXF1-012 | 589 | 115aa | ENSP00000431381.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PLA7 E9PMV7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000531474.2 | NXF1-002 | 548 | 63aa | ENSP00000437296.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PMV7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000525576.1 | NXF1-010 | 572 | 76aa | ENSP00000432530.1 | Nonsense mediated decay | E9PQA4 | - | - | |
| ENST00000533048.1 | NXF1-014 | 922 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000531579.1 | NXF1-009 | 590 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000526163.1 | NXF1-011 | 569 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000533499.1 | NXF1-007 | 936 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000533440.1 | NXF1-015 | 579 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000527064.1 | NXF1-008 | 572 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000527497.1 | NXF1-017 | 529 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000531872.1 | NXF1-016 | 390 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
