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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CLSTN2 ENSG00000158258

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Description

calsyntenin 2 [Source:HGNC Symbol;Acc:17448]

Gene Synonyms

ALC-GAMMA, CDHR13, CS2, CSTN2, FLJ39113, alcagamma

Location

Chromosome 3: 139,654,027-140,296,239 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 2 transcripts (splice variants) and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000458420.3	CLSTN2-001	14202	955aa	ENSP00000402460.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3112	B3KU27 B3KUA5 Q9H4D0	NM_022131.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511524.1	CLSTN2-002	2405	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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