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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CABP1 ENSG00000157782

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Description

calcium binding protein 1 [Source:HGNC Symbol;Acc:1384]

Gene Synonyms

CALBRAIN, HCALB_BR

Location

Chromosome 12: 121,078,355-121,105,127 forward strand.

GRCh37:CM000674.1

About this gene

This gene has 5 transcripts (splice variants), 298 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316803.3	CABP1-001	1658	370aa	ENSP00000317310.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31913	Q9NZU7	NM_001033677.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000453000.1	CABP1-004	1857	306aa	ENSP00000398959.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J8G2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000288616.3	CABP1-003	1369	227aa	ENSP00000288616.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9205	Q9NZU7	NM_031205.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000351200.2	CABP1-002	770	167aa	ENSP00000288615.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9204	Q9NZU7	NM_004276.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000498082.1	CABP1-005	3048	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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