Gene: CLEC1A ENSG00000150048

Description

C-type lectin domain family 1, member A [Source:HGNC Symbol;Acc:24355]

Gene Synonyms

CLEC1, MGC34328

Location

GRCh37:CM000674.1

About this gene

This gene has 5 transcripts (splice variants) and 6 paralogues.

Transcripts

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315330.4	CLEC1A-001	2685	280aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8612	F8WCT4 Q8NC01	NM_016511.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000457018.2	CLEC1A-003	1686	247aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PFB4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000420265.2	CLEC1A-004	1165	188aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ESV9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000414501.2	CLEC1A-002	562	70aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WCT4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000544104.1	CLEC1A-006	563	66aa	Nonsense mediated decay		F5H038	-	-

Summary

Name

CLEC1A (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: Q8NC01

CCDS

This gene is a member of the Human CCDS set: CCDS8612.1

Ensembl version

ENSG00000150048.6

Other assemblies

This gene maps to 10,069,554-10,111,627 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:	OTTHUMG00000168504 (version 2)

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