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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HMGCLL1 ENSG00000146151

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Description

3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1 [Source:HGNC Symbol;Acc:21359]

Gene Synonyms

DKFZP434G1411, bA418P12.1, er-cHL

Location

Chromosome 6: 55,299,167-55,444,012 reverse strand.

GRCh37:CM000668.1

About this gene

This gene has 10 transcripts (splice variants), 202 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000398661.2	HMGCLL1-004	2532	370aa	ENSP00000381654.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43475	Q8TB92	NM_019036.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000274901.4	HMGCLL1-001	2475	340aa	ENSP00000274901.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43474	Q8TB92	NM_001042406.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000428842.1	HMGCLL1-003	2437	151aa	ENSP00000412924.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G5E9S9 Q9NT06	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000308161.4	HMGCLL1-007	1314	308aa	ENSP00000309737.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TB92	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000370850.2	HMGCLL1-005	1171	237aa	ENSP00000359887.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z212	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000508459.1	HMGCLL1-006	884	174aa	ENSP00000424309.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z4D4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000358072.5	HMGCLL1-201	202	53aa	ENSP00000350779.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TB92	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000370852.2	HMGCLL1-002	2445	53aa	ENSP00000359889.2	Nonsense mediated decay		Q8TB92	-	-
ENST00000515546.1	HMGCLL1-008	569	39aa	ENSP00000426054.1	Nonsense mediated decay		D6RHJ2	-	-
ENST00000507223.1	HMGCLL1-009	512	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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