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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATG12 ENSG00000145782

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Description

autophagy related 12 [Source:HGNC Symbol;Acc:588]

Gene Synonyms

APG12, APG12L, FBR93, HAPG12

Location

Chromosome 5: 115,163,893-115,177,555 reverse strand.

GRCh37:CM000667.1

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000509910.1	ATG12-001	4333	140aa	ENSP00000425107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4122	O94817	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000274459.4	ATG12-201	4330	187aa	ENSP00000274459.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C1IDX9	NM_004707.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000500945.2	ATG12-003	1430	74aa	ENSP00000425164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS64222	O94817	NM_001277783.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513322.1	ATG12-002	1558	56aa	ENSP00000424529.1	Nonsense mediated decay		D6RB14	-	-
ENST00000379594.3	ATG12-007	1082	75aa	ENSP00000368913.3	Nonsense mediated decay		H7BYD7	-	-
ENST00000505993.1	ATG12-009	773	66aa	ENSP00000425948.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000513167.1	ATG12-008	732	59aa	ENSP00000425277.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000509598.1	ATG12-004	2106	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513292.1	ATG12-014	692	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514775.1	ATG12-010	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505252.1	ATG12-005	3274	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508464.1	ATG12-012	1211	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000507793.1	ATG12-013	807	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511984.1	ATG12-011	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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