Description
heat shock 60kDa protein 1 (chaperonin) [Source:HGNC Symbol;Acc:5261]
Gene Synonyms
CPN60, GROEL, HLD4, HSP-60, HSP60, HSP65, HuCHA60, SPG13
Location
Chromosome 2: 198,351,305-198,381,461 reverse strand.
GRCh37:CM000664.1
About this gene
This gene has 15 transcripts (splice variants) and is associated with 6 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000388968.3 | HSPD1-001 | 2455 | 573aa | ENSP00000373620.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33357 | C9J0S9 C9JCQ4 C9JL19 E7EXB4 P10809 Q53QD5 Q53SE2 | NM_002156.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000345042.2 | HSPD1-201 | 2299 | 573aa | ENSP00000340019.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33357 | C9J0S9 C9JCQ4 C9JL19 E7EXB4 P10809 Q53QD5 Q53SE2 | NM_199440.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000452200.1 | HSPD1-006 | 888 | 221aa | ENSP00000412717.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J0S9 C9JCQ4 C9JL19 E7EXB4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000430176.1 | HSPD1-013 | 754 | 234aa | ENSP00000393670.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J0S9 C9JCQ4 C9JL19 E7ESH4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000544407.1 | HSPD1-202 | 748 | 158aa | ENSP00000441296.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z712 C9J0S9 C9JCQ4 C9JL19 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000439605.1 | HSPD1-011 | 578 | 83aa | ENSP00000402478.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J0S9 C9JL19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000428204.1 | HSPD1-010 | 549 | 94aa | ENSP00000396460.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J0S9 C9JCQ4 C9JL19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000418022.1 | HSPD1-012 | 533 | 58aa | ENSP00000412227.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J0S9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000426480.1 | HSPD1-009 | 529 | 175aa | ENSP00000414446.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J0S9 C9JCQ4 C9JL19 C9JL25 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000440114.1 | HSPD1-007 | 619 | 48aa | ENSP00000390404.1 | Nonsense mediated decay | F8WBB1 | - | - | |
| ENST00000491249.1 | HSPD1-003 | 860 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476746.1 | HSPD1-008 | 853 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461097.1 | HSPD1-014 | 714 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000486181.1 | HSPD1-005 | 648 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000482167.1 | HSPD1-004 | 491 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
