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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: MEIS1 ENSG00000143995

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Description

Meis homeobox 1 [Source:HGNC Symbol;Acc:7000]

Location

Chromosome 2: 66,660,584-66,801,001 forward strand.

GRCh37:CM000664.1

About this gene

This gene has 19 transcripts (splice variants), 250 orthologues, 13 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000272369.9	MEIS1-001	4291	390aa	ENSP00000272369.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46309	O00470 Q53R57 Q53RD5 Q8IZZ2	NM_002398.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000488550.1	MEIS1-002	5111	378aa	ENSP00000475161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q53R57 Q53RD5 U3KPR8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000407092.2	MEIS1-201	3084	465aa	ENSP00000384461.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W8U3 Q53R57 Q53RD5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000560281.2	MEIS1-017	2773	370aa	ENSP00000454209.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNY8 Q53R57 Q53RD5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000398506.2	MEIS1-003	2659	463aa	ENSP00000381518.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O00470 Q53R57	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000495021.2	MEIS1-016	1913	325aa	ENSP00000440571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYS8 Q53R57 Q8IZZ2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000444274.2	MEIS1-202	1499	220aa	ENSP00000403206.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z4T5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000606455.1	MEIS1-018	564	160aa	ENSP00000475982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q53R57 U3KQK9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000450027.1	MEIS1-014	558	186aa	ENSP00000395827.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q53R57	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000437869.1	MEIS1-006	363	121aa	ENSP00000397418.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000491706.1	MEIS1-008	1900	96aa	ENSP00000475875.1	Nonsense mediated decay		U3KQH3	-	-
ENST00000475239.1	MEIS1-012	573	61aa	ENSP00000475692.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000542964.1	MEIS1-015	553	48aa	ENSP00000475222.1	Nonsense mediated decay		U3KPU2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000409622.1	MEIS1-010	551	4aa	ENSP00000386514.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000466811.1	MEIS1-011	526	28aa	ENSP00000476169.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000409517.1	MEIS1-013	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490726.1	MEIS1-005	474	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496248.1	MEIS1-009	468	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498705.1	MEIS1-007	532	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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