Description
intraflagellar transport 172 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:30391]
Gene Synonyms
KIAA1179, NPHP17, SLB, osm-1, wim
Location
Chromosome 2: 27,667,238-27,712,656 reverse strand.
GRCh37:CM000664.1
About this gene
This gene has 18 transcripts (splice variants) and is associated with 7 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000260570.3 | IFT172-001 | 5415 | 1749aa | ENSP00000260570.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1755 | H7C161 Q9UG01 | NM_015662.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000359466.6 | IFT172-004 | 2207 | 532aa | ENSP00000352443.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A5PKZ0 F5GZ56 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000416524.2 | IFT172-005 | 1982 | 511aa | ENSP00000407408.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZ56 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000443889.1 | IFT172-012 | 690 | 196aa | ENSP00000404082.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000509128.1 | IFT172-019 | 1723 | 324aa | ENSP00000427255.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000450564.1 | IFT172-010 | 760 | 96aa | ENSP00000399017.1 | Nonsense mediated decay | H7C186 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000420854.1 | IFT172-016 | 569 | 162aa | ENSP00000398633.1 | Nonsense mediated decay | H7C161 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000507184.1 | IFT172-017 | 5565 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476264.2 | IFT172-002 | 1867 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000511842.1 | IFT172-018 | 1832 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000475476.2 | IFT172-006 | 781 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000489492.1 | IFT172-008 | 653 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000494163.1 | IFT172-014 | 607 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476693.1 | IFT172-009 | 517 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000480892.1 | IFT172-013 | 477 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000479419.1 | IFT172-015 | 420 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000475909.1 | IFT172-011 | 402 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000463613.1 | IFT172-007 | 360 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
