Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: CAPN9 ENSG00000135773

.

Description

calpain 9 [Source:HGNC Symbol;Acc:1486]

Gene Synonyms

GC36, NCL4, nCL-4

Location

Chromosome 1: 230,883,130-230,937,749 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 4 transcripts (splice variants) and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000271971.2	CAPN9-001	2362	690aa	ENSP00000271971.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1586	O14815	NM_006615.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354537.1	CAPN9-002	2484	664aa	ENSP00000346538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31053	O14815	NM_016452.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366666.2	CAPN9-201	2123	627aa	ENSP00000355626.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ESS6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480004.1	CAPN9-003	510	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

.

Summary

.

.