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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LOXL2 ENSG00000134013

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Description

lysyl oxidase-like 2 [Source:HGNC Symbol;Acc:6666]

Gene Synonyms

LOR2, WS9-14

Location

Chromosome 8: 23,154,702-23,282,841 reverse strand.

GRCh37:CM000670.1

About this gene

This gene has 15 transcripts (splice variants) and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389131.3	LOXL2-001	3549	774aa	ENSP00000373783.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34864	E5RFE2 E5RI22 E5RJL2 Q9Y4K0	NM_002318.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524144.1	LOXL2-014	975	258aa	ENSP00000427883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFE2 E5RFY0 E5RI22 E5RJL2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520871.1	LOXL2-009	892	218aa	ENSP00000429778.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFE2 E5RHH3 E5RI22 E5RJL2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519243.1	LOXL2-010	763	95aa	ENSP00000428933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFE2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000524168.1	LOXL2-012	746	139aa	ENSP00000428497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFE2 E5RI22	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520349.1	LOXL2-005	620	207aa	ENSP00000427907.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000518083.1	LOXL2-013	588	151aa	ENSP00000430519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFE2 E5RI22 E5RJL2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523833.2	LOXL2-016	559	101aa	ENSP00000473322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMS2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518878.1	LOXL2-011	689	67aa	ENSP00000427826.1	Nonsense mediated decay		H0YAP6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000518472.1	LOXL2-003	725	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519809.1	LOXL2-004	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520925.1	LOXL2-006	965	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522446.1	LOXL2-007	665	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520617.1	LOXL2-008	502	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524075.1	LOXL2-015	419	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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