Description
Rho guanine nucleotide exchange factor (GEF) 16 [Source:HGNC Symbol;Acc:15515]
Gene Synonyms
EPHEXIN4, GEF16, NBR
Location
Chromosome 1: 3,370,990-3,397,677 forward strand.
GRCh37:CM000663.1
About this gene
This gene has 8 transcripts (splice variants) and 5 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000378378.4 | ARHGEF16-001 | 3061 | 709aa | ENSP00000367629.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46 | B0QZD3 Q5VV41 | NM_014448.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000378371.2 | ARHGEF16-003 | 2219 | 421aa | ENSP00000367622.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B0QZD3 Q5VV41 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000378373.1 | ARHGEF16-002 | 2211 | 421aa | ENSP00000367624.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B0QZD3 Q5VV41 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000413250.2 | ARHGEF16-201 | 1504 | 413aa | ENSP00000408887.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B0QZD4 B4DJM7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000445297.1 | ARHGEF16-005 | 836 | 146aa | ENSP00000411936.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B0QZD3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000418137.1 | ARHGEF16-007 | 576 | 180aa | ENSP00000390853.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B0QZD4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000485984.1 | ARHGEF16-004 | 2340 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000464620.1 | ARHGEF16-006 | 1403 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
