Gene: LOXL1 ENSG00000129038

Description

lysyl oxidase-like 1 [Source:HGNC Symbol;Acc:6665]

Gene Synonyms

LOL, LOXL

Location

GRCh37:CM000677.1

About this gene

This gene has 5 transcripts (splice variants), 12 paralogues and is associated with 2 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261921.7	LOXL1-001	2351	574aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10253	Q08397	NM_005576.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000566011.1	LOXL1-002	2786	431aa	Nonsense mediated decay		H3BUV8	-	-
ENST00000567675.1	LOXL1-006	460	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000562548.1	LOXL1-005	1110	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566530.1	LOXL1-003	557	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Name

LOXL1 (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: Q08397

CCDS

This gene is a member of the Human CCDS set: CCDS10253.1

Ensembl version

ENSG00000129038.11

Other assemblies

This gene maps to 73,925,989-73,952,137 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:	OTTHUMG00000137595 (version 4)

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