Description
bromodomain containing 8 [Source:HGNC Symbol;Acc:19874]
Gene Synonyms
SMAP, SMAP2, p120
Location
Chromosome 5: 137,475,455-137,514,675 reverse strand.
GRCh37:CM000667.1
About this gene
This gene has 27 transcripts (splice variants) and 290 orthologues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000254900.5 | BRD8-001 | 4388 | 1235aa | ENSP00000254900.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4198 | F8WBH2 F8WDX5 Q9H0E9 | NM_139199.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000230901.5 | BRD8-002 | 3198 | 951aa | ENSP00000230901.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34241 | F8WBH2 F8WDX5 Q9H0E9 | NM_006696.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000454473.1 | BRD8-003 | 3005 | 892aa | ENSP00000398067.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C127 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000402931.1 | BRD8-006 | 2982 | 878aa | ENSP00000384845.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B5MCW3 F8WBH2 F8WDX5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000411594.2 | BRD8-201 | 2967 | 866aa | ENSP00000394330.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54907 | F8WBH2 F8WDX5 H7C179 Q9H0E9 | NM_001164326.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000418329.1 | BRD8-004 | 2912 | 861aa | ENSP00000398873.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C179 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000441656.1 | BRD8-005 | 2899 | 857aa | ENSP00000398084.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000455658.2 | BRD8-202 | 2868 | 837aa | ENSP00000408396.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W820 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000427976.1 | BRD8-019 | 1011 | 336aa | ENSP00000392646.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C026 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000511898.1 | BRD8-026 | 586 | 195aa | ENSP00000426385.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YA84 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000453824.1 | BRD8-013 | 561 | 187aa | ENSP00000407129.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C2P4 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000430331.1 | BRD8-007 | 432 | 122aa | ENSP00000407414.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JV05 F8WDX5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000512140.1 | BRD8-022 | 2876 | 48aa | ENSP00000427475.1 | Nonsense mediated decay | D6RID0 | - | - | |
| ENST00000506167.1 | BRD8-027 | 1363 | 292aa | ENSP00000427126.1 | Nonsense mediated decay | H0YAH7 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000432618.1 | BRD8-011 | 956 | 79aa | ENSP00000398676.1 | Nonsense mediated decay | F8WBH2 F8WDX5 | - | - | |
| ENST00000428808.1 | BRD8-010 | 754 | 39aa | ENSP00000414625.1 | Nonsense mediated decay | F8WDX5 | - | - | |
| ENST00000472478.2 | BRD8-018 | 745 | 36aa | ENSP00000420884.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000450756.1 | BRD8-008 | 590 | 67aa | ENSP00000396487.1 | Nonsense mediated decay | F8WCS7 F8WDX5 | - | - | |
| ENST00000515014.1 | BRD8-028 | 726 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000425764.1 | BRD8-012 | 546 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000463620.1 | BRD8-014 | 764 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000471892.2 | BRD8-020 | 687 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000515254.1 | BRD8-025 | 557 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000489351.1 | BRD8-017 | 553 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000471437.1 | BRD8-009 | 547 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000483805.1 | BRD8-015 | 543 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000460746.1 | BRD8-016 | 475 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
