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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CHORDC1 ENSG00000110172

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Description

cysteine and histidine-rich domain (CHORD) containing 1 [Source:HGNC Symbol;Acc:14525]

Gene Synonyms

CHP1

Location

Chromosome 11: 89,934,328-89,956,532 reverse strand.

GRCh37:CM000673.1

About this gene

This gene has 11 transcripts (splice variants), 241 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000320585.6	CHORDC1-001	2654	332aa	ENSP00000319255.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8289	E9PHZ2 Q9UHD1	NM_012124.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000529726.1	CHORDC1-011	4805	144aa	ENSP00000436632.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PHZ2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000457199.2	CHORDC1-012	2003	313aa	ENSP00000401080.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44705	E9PHZ2 Q9UHD1	NM_001144073.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000529987.1	CHORDC1-003	1698	144aa	ENSP00000433719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PHZ2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000530765.1	CHORDC1-007	564	116aa	ENSP00000431929.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIZ4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000525317.1	CHORDC1-010	1136	184aa	ENSP00000436945.1	Nonsense mediated decay		E9PPQ5	-	-
ENST00000529402.1	CHORDC1-006	809	117aa	ENSP00000432019.1	Nonsense mediated decay		E9PIF7	-	-
ENST00000533062.1	CHORDC1-008	575	39aa	ENSP00000433440.1	Nonsense mediated decay		E9PL00	-	-
ENST00000533772.1	CHORDC1-009	566	120aa	ENSP00000434040.1	Nonsense mediated decay		E9PSD5	-	-
ENST00000533724.1	CHORDC1-004	5361	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533739.1	CHORDC1-013	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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