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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SNX25 ENSG00000109762

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Description

sorting nexin 25 [Source:HGNC Symbol;Acc:21883]

Gene Synonyms

SBBI31

Location

Chromosome 4: 186,125,391-186,291,339 forward strand.

GRCh37:CM000666.1

About this gene

This gene has 6 transcripts (splice variants) and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000504273.1	SNX25-001	3323	840aa	ENSP00000426255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34116	B3KTI8 Q9H3E2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000264694.8	SNX25-004	3264	840aa	ENSP00000264694.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34116	B3KTI8 Q9H3E2	NM_031953.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504959.1	SNX25-003	1868	142aa	ENSP00000424826.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000512853.1	SNX25-002	1937	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506896.1	SNX25-005	518	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513433.1	SNX25-006	748	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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