Gene: DDX58 ENSG00000107201

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Source:HGNC Symbol;Acc:19102]

Gene Synonyms

DKFZp434J1111, FLJ13599, RIG-I, RIGI, RLR-1

Location

Chromosome 9: 32,455,300-32,526,322 reverse strand.

GRCh37:CM000671.1

About this gene

This gene has 5 transcripts (splice variants), 3 paralogues and is associated with 2 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379883.2	DDX58-001	4353	925aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6526	A2A376 O95786	NM_014314.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000379882.1	DDX58-201	4621	880aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A376 O95786	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000379868.1	DDX58-002	4089	722aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A376	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000542096.1	DDX58-202	3253	854aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A376 B3KWW1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000545044.1	DDX58-203	2122	536aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5W6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Name

DDX58 (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: O95786

CCDS

This gene is a member of the Human CCDS set: CCDS6526.1

Ensembl version

ENSG00000107201.5

Other assemblies

This gene maps to 32,455,302-32,526,324 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:	OTTHUMG00000019746 (version 2)

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Gene: DDX58 ENSG00000107201

Summary