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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HOXA1 ENSG00000105991

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Description

homeobox A1 [Source:HGNC Symbol;Acc:5099]

Gene Synonyms

BSAS, HOX1, HOX1F

Location

Chromosome 7: 27,132,612-27,135,615 reverse strand.

GRCh37:CM000669.1

About this gene

This gene has 2 transcripts (splice variants), 14 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000343060.4	HOXA1-001	2517	335aa	ENSP00000343246.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5401	P49639	NM_005522.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355633.5	HOXA1-002	2016	137aa	ENSP00000347851.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5402	E7ERT8	NM_153620.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

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Summary

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