Description
autophagy related 4A, cysteine peptidase [Source:HGNC Symbol;Acc:16489]
Gene Synonyms
APG4A, AUTL2
Location
Chromosome X: 107,334,898-107,397,901 forward strand.
GRCh37:CM000685.1
About this gene
This gene has 10 transcripts (splice variants), 160 orthologues and 3 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000372232.3 | ATG4A-001 | 2315 | 398aa | ENSP00000361306.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS14538 | Q8WYN0 | NM_052936.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000372254.3 | ATG4A-201 | 2199 | 374aa | ENSP00000361328.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8WYN0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000345734.3 | ATG4A-002 | 2129 | 336aa | ENSP00000298131.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS14539 | F5H3G3 Q8WYN0 | NM_178270.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000545696.1 | ATG4A-202 | 1653 | 259aa | ENSP00000438936.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H3G3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000457035.1 | ATG4A-006 | 939 | 202aa | ENSP00000416218.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000394892.2 | ATG4A-005 | 935 | 312aa | ENSP00000378354.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000372246.3 | ATG4A-003 | 2501 | 47aa | ENSP00000361320.3 | Nonsense mediated decay | F8W7J2 | - | - | |
| ENST00000343524.5 | ATG4A-004 | 1941 | 231aa | ENSP00000341833.5 | Nonsense mediated decay | G5E979 | - | - | |
| ENST00000489247.1 | ATG4A-008 | 623 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000474825.1 | ATG4A-007 | 502 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
