Description
SET binding factor 1 [Source:HGNC Symbol;Acc:10542]
Gene Synonyms
CMT4B3, DENND7A, MTMR5
Location
Chromosome 22: 50,883,429-50,913,454 reverse strand.
GRCh37:CM000684.1
About this gene
This gene has 9 transcripts (splice variants), 13 paralogues and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000380817.3 | SBF1-001 | 8008 | 1893aa | ENSP00000370196.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS14091 | O95248 Q86TK5 | NM_002972.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000348911.6 | SBF1-003 | 6045 | 1868aa | ENSP00000252027.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5E933 Q59EX9 Q68CX1 Q86TK5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000390679.3 | SBF1-201 | 5789 | 1867aa | ENSP00000375097.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O95248 Q86TK5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000418590.1 | SBF1-005 | 1578 | 415aa | ENSP00000401538.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000476293.1 | SBF1-007 | 399 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000470434.1 | SBF1-004 | 2139 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000477234.1 | SBF1-009 | 947 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000399627.3 | SBF1-008 | 811 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000473724.1 | SBF1-006 | 446 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
