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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RANBP1 ENSG00000099901

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Description

RAN binding protein 1 [Source:HGNC Symbol;Acc:9847]

Gene Synonyms

HTF9A

Location

Chromosome 22: 20,103,461-20,114,878 forward strand.

GRCh37:CM000684.1

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000331821.3	RANBP1-015	837	201aa	ENSP00000327583.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13775	C9JIC6 D3DX26 P43487	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430524.1	RANBP1-201	1879	181aa	ENSP00000401564.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KUP2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402752.1	RANBP1-001	1132	200aa	ENSP00000384925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63408	C9JIC6 C9JXG8 P43487	NM_002882.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418705.2	RANBP1-009	932	145aa	ENSP00000413502.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIC6 C9JXG8	NM_001278641.1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000423859.1	RANBP1-008	832	204aa	ENSP00000404298.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JGV6 C9JIC6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000432879.1	RANBP1-004	744	165aa	ENSP00000404724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JDM3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000448394.1	RANBP1-011	688	128aa	ENSP00000398300.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C137	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000416427.1	RANBP1-006	645	53aa	ENSP00000404126.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIC6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000411892.1	RANBP1-012	584	163aa	ENSP00000395472.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DE76 C9JIC6 C9JJ34	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000421656.1	RANBP1-007	333	53aa	ENSP00000400940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIC6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000435265.1	RANBP1-002	1879	73aa	ENSP00000390139.1	Nonsense mediated decay		F8WCY3	-	-
ENST00000467920.1	RANBP1-013	529	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486575.1	RANBP1-003	2177	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488484.1	RANBP1-005	699	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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