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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PALB2 ENSG00000083093

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Description

partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:26144]

Gene Synonyms

FANCN, FLJ21816, PNCA3

Location

Chromosome 16: 23,614,488-23,652,631 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 6 transcripts (splice variants) and is associated with 71 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261584.4	PALB2-001	4003	1186aa	ENSP00000261584.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32406	Q86YC2	NM_024675.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561514.1	PALB2-006	815	89aa	ENSP00000460666.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3R6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000566069.1	PALB2-005	619	43aa	ENSP00000459237.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000568219.1	PALB2-002	3963	35aa	ENSP00000454703.1	Nonsense mediated decay		H3BN63	-	-
ENST00000567003.1	PALB2-003	789	27aa	ENSP00000455524.1	Nonsense mediated decay		H3BPY6	-	-
ENST00000565038.1	PALB2-004	344	30aa	ENSP00000459882.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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