Description
ELKS/RAB6-interacting/CAST family member 1 [Source:HGNC Symbol;Acc:17072]
Gene Synonyms
CAST2, Cast2, ELKS, KIAA1081, MGC12974, RAB6IP2
Location
Chromosome 12: 1,099,675-1,605,099 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 24 transcripts (splice variants), 220 orthologues, 1 paralogue and is associated with 66 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000397203.2 | ERC1-201 | 9451 | 1116aa | ENSP00000380386.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8508 | K7EIZ7 K7EKH8 Q8IUD2 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000543086.3 | ERC1-001 | 9241 | 1088aa | ENSP00000438546.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53732 | K7EIZ7 K7EKH8 K7EPP6 Q8IUD2 | NM_178039.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000589028.1 | ERC1-202 | 9202 | 1116aa | ENSP00000468263.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8508 | K7EIZ7 K7EKH8 Q8IUD2 | NM_178040.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000355446.5 | ERC1-011 | 5796 | 1086aa | ENSP00000347621.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G8JLD3 K7EIZ7 K7EKH8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000360905.4 | ERC1-014 | 5789 | 1116aa | ENSP00000354158.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8508 | K7EIZ7 K7EKH8 Q8IUD2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000546231.2 | ERC1-015 | 4390 | 1120aa | ENSP00000442739.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EIZ7 K7EKH8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000592048.1 | ERC1-006 | 1275 | 344aa | ENSP00000467476.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EPP6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000589132.1 | ERC1-023 | 868 | 145aa | ENSP00000464959.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EIZ7 K7EKH8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000539802.2 | ERC1-020 | 550 | 89aa | ENSP00000467196.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000545318.2 | ERC1-005 | 546 | 89aa | ENSP00000465628.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EKH8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000440394.3 | ERC1-013 | 7040 | 992aa | ENSP00000410064.2 | Nonsense mediated decay | K7EIZ7 K7EKH8 K7EPP6 Q8IUD2 | - | - | |
| ENST00000347735.6 | ERC1-008 | 4955 | 948aa | ENSP00000340054.6 | Nonsense mediated decay | K7EIZ7 K7EKH8 K7EPP6 Q8IUD2 | - | - | |
| ENST00000542302.2 | ERC1-010 | 4323 | 976aa | ENSP00000445336.2 | Nonsense mediated decay | K7EIZ7 K7EKH8 | - | - | |
| ENST00000545948.1 | ERC1-004 | 2881 | 720aa | ENSP00000442976.1 | Nonsense mediated decay | K7EIZ7 K7EKH8 Q8IUD2 | - | - | |
| ENST00000588412.1 | ERC1-019 | 2071 | 285aa | ENSP00000467339.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000536573.2 | ERC1-003 | 1832 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000515210.2 | ERC1-012 | 591 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000543263.2 | ERC1-018 | 513 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000544277.1 | ERC1-007 | 319 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000587595.1 | ERC1-024 | 256 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000543151.1 | ERC1-002 | 2447 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000538971.2 | ERC1-016 | 2267 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000539007.1 | ERC1-017 | 748 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000541503.1 | ERC1-009 | 531 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
