Gene: KDM4A ENSG00000066135

Description

lysine (K)-specific demethylase 4A [Source:HGNC Symbol;Acc:22978]

Gene Synonyms

JHDM3A, JMJD2, JMJD2A, KIAA0677, TDRD14A

Location

GRCh37:CM000663.1

About this gene

This gene has 5 transcripts (splice variants) and 4 paralogues.

Transcripts

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372396.3	KDM4A-001	4474	1064aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS491	B4DGH3 O75164	NM_014663.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000463151.1	KDM4A-002	1023	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485249.1	KDM4A-003	852	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481296.1	KDM4A-004	560	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472265.1	KDM4A-005	380	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Name

KDM4A (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: O75164

CCDS

This gene is a member of the Human CCDS set: CCDS491.1

Ensembl version

ENSG00000066135.8

Other assemblies

This gene maps to 43,650,158-43,705,515 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:	OTTHUMG00000007560 (version 2)

Loading component