Human (GRCh37.p13)
Description

ribosomal protein S6 kinase, 90kDa, polypeptide 1 [Source:HGNC Symbol;Acc:10430]

Gene Synonyms

HU-1, MAPKAPK1A, RSK, RSK1

Location

Chromosome 1: 26,856,252-26,901,521 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 21 transcripts (splice variants) and 10 paralogues.

Show/hide columns (1 hidden)
  • Transcript ID
  • Name
  • bp
  • Protein
  • Translation ID
  • Biotype
  • CCDS
  • UniProt Match
  • RefSeq
  • Flags
Transcript IDNamebpProteinBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000531382.1RPS6KA1-0082359744aa
 
Protein coding
CCDS30649E9PMM7 Q15418 NM_001006665.1Ensembl CanonicalGENCODE Basic
ENST00000374168.2RPS6KA1-0013186735aa
 
Protein coding
CCDS284E9PMM7 Q15418 NM_002953.3GENCODE Basic
ENST00000374166.4RPS6KA1-0103131724aa
 
Protein coding
E9PGT3 E9PMM7 -GENCODE Basic
ENST00000530003.1RPS6KA1-0033023719aa
 
Protein coding
B7Z2K7 E9PMM7 E9PRI4
-GENCODE Basic
ENST00000526792.1RPS6KA1-0092596643aa
 
Protein coding
E9PMM7 Q15418 -GENCODE Basic
ENST00000374162.2RPS6KA1-2012369643aa
 
Protein coding
E9PMM7 Q15418 -GENCODE Basic
ENST00000438977.1RPS6KA1-006639115aa
 
Protein coding
Q5SVM7 -CDS 5' incomplete
ENST00000529454.1RPS6KA1-015544112aa
 
Protein coding
E9PMM7 -CDS 3' incomplete
ENST00000403732.2RPS6KA1-007498166aa
 
Protein coding
Q5SVM6 -CDS 5' and 3' incomplete
ENST00000374163.1RPS6KA1-0023202204aa
 
Nonsense mediated decay
E9PAN7 --
ENST00000366866.4RPS6KA1-016592111aa
 
Nonsense mediated decay
A6NND1 --
ENST00000525525.1RPS6KA1-01254356aa
 
Nonsense mediated decay
E9PPC1 --
ENST00000526040.2RPS6KA1-01350052aa
 
Nonsense mediated decay
E9PPN6 --
ENST00000488985.1RPS6KA1-005304No protein
 
Processed transcript
---
ENST00000531113.1RPS6KA1-0112089No protein
 
Retained intron
---
ENST00000474934.1RPS6KA1-004857No protein
 
Retained intron
---
ENST00000530607.1RPS6KA1-017580No protein
 
Retained intron
---
ENST00000524436.1RPS6KA1-014560No protein
 
Retained intron
---
ENST00000530305.1RPS6KA1-020555No protein
 
Retained intron
---
ENST00000527264.1RPS6KA1-019530No protein
 
Retained intron
---
ENST00000525582.1RPS6KA1-018486No protein
 
Retained intron
---

Loading component

Structural variants

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  • Name
  • Chr:bp
  • Genomic size (bp)
  • Class
  • Source Study
  • Study description
NameChr:bpGenomic size (bp)ClassSource StudyStudy description
nsv38773651:47851-249228449249,180,599CNVdbVar:nstd102NCBI database of human genomic structural variation: Structural Variants with clinical assertions, submitted to ClinVar by external labs.
nsv9848361:61735-249224388-CNVDGVa:nstd11Database of Genomic Variants Archive: Walter 2009 "Acquired copy number alterations in adult acute myeloid leukemia genomes." PMID:19651600
nsv9846251:82154-51782000-complex alterationDGVa:nstd92Database of Genomic Variants Archive: Forsberg 2014 "Mosaic loss of chromosome Y in peripheral blood is associated with shorter survival and higher risk of cancer." PMID:24777449
nsv38852061:82154-249218992249,136,839CNVdbVar:nstd102NCBI database of human genomic structural variation: Structural Variants with clinical assertions, submitted to ClinVar by external labs.
esv38032061:724766-224202355223,477,590tandem duplicationDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
nsv4360331:794863-224014422-insertionDGVa:nstd16Database of Genomic Variants Archive: Korbel 2007 "Paired-end mapping reveals extensive structural variation in the human genome." PMID:17901297
nsv4365051:795801-224010171223,214,371CNVDGVa:nstd16Database of Genomic Variants Archive: Korbel 2007 "Paired-end mapping reveals extensive structural variation in the human genome." PMID:17901297
nsv27728681:849467-249224684248,375,218CNVDGVa:nstd37Database of Genomic Variants Archive: International Standards for Cytogenetic Array Consortium
nsv38844141:849467-249224684248,375,218CNVdbVar:nstd102NCBI database of human genomic structural variation: Structural Variants with clinical assertions, submitted to ClinVar by external labs.
esv37947661:921843-4650701945,585,177tandem duplicationDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
esv37763721:2483156-109045041106,561,886tandem duplicationDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
esv37861011:2710208-2805590425,345,697CNVDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
esv37907781:3361399-5329567049,934,272CNVDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
esv37705861:4581429-2983638725,254,959CNVDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
esv38065161:5934268-111004795105,070,528tandem duplicationDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
esv37615281:6706926-3271920026,012,275CNVDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
nsv11469311:6858651-214875307208,016,657inversionDGVa:nstd107Database of Genomic Variants Archive: Elsa 2014 "Comprehensive analysis of a personal genome of Bedouin ancestry from Kuwait"
esv37933081:8214085-166923280158,709,196CNVDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
esv37610981:9555627-3713119327,575,567tandem duplicationDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
esv37907241:9826291-3042464820,598,358inversionDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
nsv44361811:10333430-10346708893,133,659CNVdbVar:nstd102NCBI database of human genomic structural variation: Structural Variants with clinical assertions, submitted to ClinVar by external labs.
esv37966371:11684633-3165479319,970,161CNVDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
nsv4360371:12638860-172582250-insertionDGVa:nstd16Database of Genomic Variants Archive: Korbel 2007 "Paired-end mapping reveals extensive structural variation in the human genome." PMID:17901297
nsv4829491:12700001-3460000021,900,000CNVDGVa:nstd41Database of Genomic Variants Archive: Iafrate 2004 "Detection of large-scale variation in the human genome." PMID:15286789
esv38130201:14110368-6231978748,209,420tandem duplicationDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
Showing 1 to 25 of 147 entries
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Copy number variant probes

Show/hide columns
  • Name
  • Chr:bp
  • Genomic size (bp)
  • Class
  • Source Study
  • Study description
NameChr:bpGenomic size (bp)ClassSource StudyStudy description
CN_4888191:26861094-26861118-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
CN_4888201:26871325-26871349-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
CN_4888211:26876277-26876301-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
CN_4888221:26882433-26882457-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
CN_4888231:26882916-26882940-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
CN_4888241:26886178-26886202-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
CN_0210011:26887285-26887309-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
CN_4888251:26897083-26897107-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
CN_4888261:26898672-26898696-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
CN_4888271:26900626-26900650-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0