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    Gene: PPP1R16B ENSG00000101445

    Description

    protein phosphatase 1, regulatory subunit 16B [Source:HGNC Symbol;Acc:15850]

    Gene Synonyms

    ANKRD4, KIAA0823, TIMAP

    Location

    Chromosome 20: 37,434,348-37,551,667 forward strand.

    GRCh37:CM000682.1

    About this gene

    This gene has 4 transcripts (splice variants) and 7 paralogues.

    Transcripts

    Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Transcript ID
    • Name
    • bp
    • Protein
    • Translation ID
    • Biotype
    • CCDS
    • UniProt Match
    • RefSeq
    • Flags
    Download what you seeDownload whole table
    Transcript IDNamebpProteinBiotypeCCDSUniProt MatchRefSeqFlags
    ENST00000299824.1PPP1R16B-0016251567aa
     
    Protein coding
    		CCDS13309Q96T49 NM_015568.2Ensembl CanonicalGENCODE Basic
    ENST00000373331.2PPP1R16B-0046106525aa
     
    Protein coding
    		CCDS54462Q96T49 NM_001172735.1GENCODE Basic
    ENST00000468265.1PPP1R16B-002299No protein
     
    Processed transcript
    		---
    ENST00000463749.1PPP1R16B-003268No protein
     
    Processed transcript
    		---

    Structural variants

    Structural variants

    Show/hide columns
    • Name
    • Chr:bp
    • Genomic size (bp)
    • Class
    • Source Study
    • Study description
    Download what you seeDownload whole table
    NameChr:bpGenomic size (bp)ClassSource StudyStudy description
    nsv42958820:61305-62956153-CNVDGVa:nstd11Database of Genomic Variants Archive: Walter 2009 "Acquired copy number alterations in adult acute myeloid leukemia genomes." PMID:19651600
    nsv277823420:61569-6291555562,853,987CNVDGVa:nstd37Database of Genomic Variants Archive: International Standards for Cytogenetic Array Consortium
    nsv389531420:61569-6291555562,853,987CNVdbVar:nstd102NCBI database of human genomic structural variation: Structural Variants with clinical assertions, submitted to ClinVar by external labs.
    nsv389652020:63244-6291246362,849,220CNVdbVar:nstd102NCBI database of human genomic structural variation: Structural Variants with clinical assertions, submitted to ClinVar by external labs.
    nsv390507220:63244-6294878862,885,545CNVdbVar:nstd102NCBI database of human genomic structural variation: Structural Variants with clinical assertions, submitted to ClinVar by external labs.
    nsv389275020:63244-6296129462,898,051CNVdbVar:nstd102NCBI database of human genomic structural variation: Structural Variants with clinical assertions, submitted to ClinVar by external labs.
    nsv91816220:69623-6290450162,834,879CNVDGVa:nstd75Database of Genomic Variants Archive: International Standards for Cytogenomic Arrays Consortium (prenatal dataset) PMID:21844811 PMID:20466091
    nsv53313820:80198-6290867462,828,477CNVDGVa:nstd37Database of Genomic Variants Archive: International Standards for Cytogenetic Array Consortium
    nsv392021820:80198-6290867462,828,477CNVdbVar:nstd102NCBI database of human genomic structural variation: Structural Variants with clinical assertions, submitted to ClinVar by external labs.
    esv380494920:1226913-3795452236,727,610CNVDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
    esv381460620:3561760-5120461447,642,855tandem duplicationDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
    esv378598020:5952574-5092660144,974,028tandem duplicationDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
    esv379008720:7936168-5092011142,983,944CNVDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
    esv378900320:8357110-5638999948,032,890CNVDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
    esv380496220:8726325-4458962335,863,299CNVDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
    esv380808220:8726326-4458962335,863,298CNVDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
    esv379300120:8877694-5094338442,065,691CNVDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
    nsv53170720:9792081-3794559928,153,519CNVDGVa:nstd101Database of Genomic Variants Archive: Kaminsky 2011 "An evidence-based approach to establish the functional and clinical significance of copy number variants in intellectual and developmental disabilities."
    nsv391014220:9792081-3794559928,153,519CNVdbVar:nstd102NCBI database of human genomic structural variation: Structural Variants with clinical assertions, submitted to ClinVar by external labs.
    esv375942920:9853456-5449118244,637,727CNVDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
    esv379427920:9923378-5339036043,466,983tandem duplicationDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
    esv381113920:12367591-5426606741,898,477tandem duplicationDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
    esv380985420:12480248-5278999440,309,747tandem duplicationDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
    esv378807020:12501965-5288170740,379,743tandem duplicationDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
    esv380274120:12868853-5274660039,877,748CNVDGVa:estd192Database of Genomic Variants Archive: Catalogue of Somatic Mutations in Cancer (COSMIC) version 71
    Showing 1 to 25 of 323 entries
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    Copy number variant probes

    Show/hide columns
    • Name
    • Chr:bp
    • Genomic size (bp)
    • Class
    • Source Study
    • Study description
    Download what you seeDownload whole table
    NameChr:bpGenomic size (bp)ClassSource StudyStudy description
    CN_89654020:37439347-37439371-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89654120:37442057-37442081-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89654220:37443579-37443603-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89654320:37446273-37446297-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_21058420:37449897-37449921-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89654420:37453866-37453890-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89654520:37454283-37454307-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89654620:37459530-37459554-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89654720:37460668-37460692-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_21058620:37462346-37462370-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89654820:37464196-37464220-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89655020:37467981-37468005-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89655120:37473072-37473096-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89655220:37474813-37474837-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89655320:37477634-37477658-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89655420:37477939-37477963-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89655520:37480300-37480324-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89655620:37481784-37481808-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89655720:37486107-37486131-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89655820:37489337-37489361-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89655920:37493409-37493433-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89656020:37503170-37503194-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89656120:37503683-37503707-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89656220:37507196-37507220-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    CN_89656320:37507703-37507727-CNV_PROBEAffy GenomeWideSNP_6 CNVCopy Number Variation (CNV) probes from the Affymetrix Genome-Wide Human SNP Array 6.0
    Showing 1 to 25 of 43 entries
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