Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CXCL2 ENSG00000081041

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Description

chemokine (C-X-C motif) ligand 2 [Source:HGNC Symbol;Acc:4603]

Gene Synonyms

CINC-2a, GRO2, GROB, GROb, MGSA-b, MIP-2a, MIP2, MIP2A, SCYB2

Location

Chromosome 4: 74,962,752-74,965,010 reverse strand.

GRCh37:CM000666.1

About this gene

This gene has 3 transcripts (splice variants) and 8 paralogues.

Transcripts

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Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000508487.2	CXCL2-001	1218	107aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34008	P19875 Q6LD33	NM_002089.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000296031.4	CXCL2-003	577	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510048.1	CXCL2-002	568	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Regulation

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Feature type
Accession
Location
Source

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Feature type	Accession	Location	Source
TarBase	MIMAT0000222	/Homo_sapiens/Location/View?db=core;g=ENSG00000081041;r=4:74963192-74963216	Tarbase hsa-miR-192-5p target
TarBase	MIMAT0000255	/Homo_sapiens/Location/View?db=core;g=ENSG00000081041;r=4:74964609-74964632	Tarbase hsa-miR-34a-5p target
TarBase	MIMAT0000257	/Homo_sapiens/Location/View?db=core;g=ENSG00000081041;r=4:74962988-74963006	Tarbase hsa-miR-181b-5p target
TarBase	MIMAT0000272	/Homo_sapiens/Location/View?db=core;g=ENSG00000081041;r=4:74963192-74963216	Tarbase hsa-miR-215-5p target
TarBase	MIMAT0000424	/Homo_sapiens/Location/View?db=core;g=ENSG00000081041;r=4:74963082-74963100	Tarbase hsa-miR-128-3p target
TarBase	MIMAT0000432	/Homo_sapiens/Location/View?db=core;g=ENSG00000081041;r=4:74962836-74962858	Tarbase hsa-miR-141-3p target
TarBase	MIMAT0000682	/Homo_sapiens/Location/View?db=core;g=ENSG00000081041;r=4:74962836-74962858	Tarbase hsa-miR-200a-3p target
TarBase	MIMAT0000755	/Homo_sapiens/Location/View?db=core;g=ENSG00000081041;r=4:74963356-74963384	Tarbase hsa-miR-323a-3p target
TarBase	MIMAT0001541	/Homo_sapiens/Location/View?db=core;g=ENSG00000081041;r=4:74964609-74964631	Tarbase hsa-miR-449a target
TarBase	MIMAT0002821	/Homo_sapiens/Location/View?db=core;g=ENSG00000081041;r=4:74962988-74963006	Tarbase hsa-miR-181d-5p target
TarBase	MIMAT0003271	/Homo_sapiens/Location/View?db=core;g=ENSG00000081041;r=4:74962952-74962972	Tarbase hsa-miR-603 target
TarBase	MIMAT0003945	/Homo_sapiens/Location/View?db=core;g=ENSG00000081041;r=4:74964871-74964894	Tarbase hsa-miR-765 target
TarBase	MIMAT0004557	/Homo_sapiens/Location/View?db=core;g=ENSG00000081041;r=4:74963175-74963192	Tarbase hsa-miR-34a-3p target
TarBase	MIMAT0004586	/Homo_sapiens/Location/View?db=core;g=ENSG00000081041;r=4:74963174-74963195	Tarbase hsa-miR-15b-3p target
TarBase	MIMAT0004685	/Homo_sapiens/Location/View?db=core;g=ENSG00000081041;r=4:74962930-74962957	Tarbase hsa-miR-302d-5p target
TarBase	MIMAT0004687	/Homo_sapiens/Location/View?db=core;g=ENSG00000081041;r=4:74963350-74963369	Tarbase hsa-miR-371a-5p target
TarBase	MIMAT0004697	/Homo_sapiens/Location/View?db=core;g=ENSG00000081041;r=4:74964884-74964904	Tarbase hsa-miR-151a-5p target

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