Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PPP1R16B ENSG00000101445

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Description

protein phosphatase 1, regulatory subunit 16B [Source:HGNC Symbol;Acc:15850]

Gene Synonyms

ANKRD4, KIAA0823, TIMAP

Location

Chromosome 20: 37,434,348-37,551,667 forward strand.

GRCh37:CM000682.1

About this gene

This gene has 4 transcripts (splice variants) and 7 paralogues.

Transcripts

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Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000299824.1	PPP1R16B-001	6251	567aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13309	Q96T49	NM_015568.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000373331.2	PPP1R16B-004	6106	525aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54462	Q96T49	NM_001172735.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000468265.1	PPP1R16B-002	299	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463749.1	PPP1R16B-003	268	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Regulation

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Feature type
Accession
Location
Source

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Feature type	Accession	Location	Source
TarBase	MIMAT0000065	/Homo_sapiens/Location/View?db=core;g=ENSG00000101445;r=20:37529254-37529276	Tarbase hsa-let-7d-5p target
TarBase	MIMAT0000084	/Homo_sapiens/Location/View?db=core;g=ENSG00000101445;r=20:37550700-37550723	Tarbase hsa-miR-27a-3p target
TarBase	MIMAT0000085	/Homo_sapiens/Location/View?db=core;g=ENSG00000101445;r=20:37550599-37550624	Tarbase hsa-miR-28-5p target
TarBase	MIMAT0000764	/Homo_sapiens/Location/View?db=core;g=ENSG00000101445;r=20:37534714-37534738	Tarbase hsa-miR-339-5p target
TarBase	MIMAT0004495	/Homo_sapiens/Location/View?db=core;g=ENSG00000101445;r=20:37464785-37464805	Tarbase hsa-miR-22-5p target
TarBase	MIMAT0004568	/Homo_sapiens/Location/View?db=core;g=ENSG00000101445;r=20:37549345-37549353	Tarbase hsa-miR-221-5p target
TarBase	MIMAT0004776	/Homo_sapiens/Location/View?db=core;g=ENSG00000101445;r=20:37550507-37550529	Tarbase hsa-miR-505-5p target
TarBase	MIMAT0004795	/Homo_sapiens/Location/View?db=core;g=ENSG00000101445;r=20:37547643-37547662	Tarbase hsa-miR-574-5p target
TarBase	MIMAT0004795	/Homo_sapiens/Location/View?db=core;g=ENSG00000101445;r=20:37547652-37547672	Tarbase hsa-miR-574-5p target
TarBase	MIMAT0004926	/Homo_sapiens/Location/View?db=core;g=ENSG00000101445;r=20:37550602-37550624	Tarbase hsa-miR-708-5p target
TarBase	MIMAT0009448	/Homo_sapiens/Location/View?db=core;g=ENSG00000101445;r=20:37464725-37464740	Tarbase hsa-miR-1973 target
TarBase	MIMAT0022492	/Homo_sapiens/Location/View?db=core;g=ENSG00000101445;r=20:37534716-37534738	Tarbase hsa-miR-5699-3p target

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