Gene: LOXL1 ENSG00000129038

Description

lysyl oxidase-like 1 [Source:HGNC Symbol;Acc:6665]

Gene Synonyms

LOL, LOXL

Location

GRCh37:CM000677.1

About this gene

This gene has 5 transcripts (splice variants), 12 paralogues and is associated with 2 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261921.7	LOXL1-001	2351	574aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10253	Q08397	NM_005576.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000566011.1	LOXL1-002	2786	431aa	Nonsense mediated decay		H3BUV8	-	-
ENST00000567675.1	LOXL1-006	460	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000562548.1	LOXL1-005	1110	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566530.1	LOXL1-003	557	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

External references

This gene corresponds to the following database identifiers:

Filter

External database	Database identifier
Expression Atlas	ENSG00000129038 [view all locations]
HGNC Symbol	LOXL1 lysyl oxidase-like 1 [view all locations]
MIM gene	LYSYL OXIDASE-LIKE 1 [*153456] LYSYL OXIDASE-LIKE 1; LOXL1 [view all locations]
MIM morbid	EXFOLIATION SYNDROME [#177650] EXFOLIATION SYNDROME; XFS [view all locations]
NCBI gene (formerly Entrezgene)	LOXL1 lysyl oxidase-like 1 [view all locations]
UniGene	Hs.598750 [Target %id: 16; Query %id: 93] Transcribed locus [view all locations] Hs.65436 [Target %id: 99; Query %id: 99] Lysyl oxidase-like 1 [view all locations]
WikiGene	LOXL1 lysyl oxidase-like 1 [view all locations]

The following database identifiers correspond to the transcripts of this gene:

Transcript ID	Transcript name	CCDS	UniProtKB/ Swiss-Prot	RefSeq mRNA	Human Protein Atlas
ENST00000261921.7	LOXL1-001	CCDS10253.1	LOXL1_HUMAN	NM_005576.2	HPA042111 HPA042111
ENST00000566011.1	LOXL1-002				HPA042111
ENST00000566530.1	LOXL1-003
ENST00000562548.1	LOXL1-005
ENST00000567675.1	LOXL1-006