Gene: KDM4A ENSG00000066135

Description

lysine (K)-specific demethylase 4A [Source:HGNC Symbol;Acc:22978]

Gene Synonyms

JHDM3A, JMJD2, JMJD2A, KIAA0677, TDRD14A

Location

GRCh37:CM000663.1

About this gene

This gene has 5 transcripts (splice variants) and 4 paralogues.

Transcripts

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372396.3	KDM4A-001	4474	1064aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS491	B4DGH3 O75164	NM_014663.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000463151.1	KDM4A-002	1023	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485249.1	KDM4A-003	852	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481296.1	KDM4A-004	560	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472265.1	KDM4A-005	380	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

External references

This gene corresponds to the following database identifiers:

Filter

External database	Database identifier
Expression Atlas	ENSG00000066135 [view all locations]
HGNC Symbol	KDM4A lysine (K)-specific demethylase 4A [view all locations]
MIM gene	LYSINE-SPECIFIC DEMETHYLASE 4A [*609764] LYSINE-SPECIFIC DEMETHYLASE 4A; KDM4A [view all locations]
NCBI gene (formerly Entrezgene)	KDM4A lysine (K)-specific demethylase 4A [view all locations]
UniGene	Hs.155983 [Target %id: 100; Query %id: 98] Lysine (K)-specific demethylase 4A [view all locations] Hs.607166 [Target %id: 4; Query %id: 99] Transcribed locus [view all locations] Hs.620827 [Target %id: 8; Query %id: 97] Transcribed locus [view all locations]
WikiGene	KDM4A lysine (K)-specific demethylase 4A [view all locations]

The following database identifiers correspond to the transcripts of this gene:

Transcript ID	Transcript name	CCDS	UniProtKB/ Swiss-Prot	RefSeq mRNA	Human Protein Atlas	PDB
ENST00000372396.3	KDM4A-001	CCDS491.1	KDM4A_HUMAN	NM_014663.2	HPA007610 HPA007610	2GF7 2GFA 2GP3 2GP5 2OQ6 2OQ7 2OS2 2OT7 2OX0 2P5B 2PXJ 2Q8C 2Q8D 2Q8E 2QQR 2QQS 2VD7 2WWJ 2YBK 2YBP 2YBS 3NJY 3PDQ 3RVH 3U4S 4AI9 4GD4
ENST00000463151.1	KDM4A-002
ENST00000485249.1	KDM4A-003
ENST00000472265.1	KDM4A-005
ENST00000481296.1	KDM4A-004