Description
slit homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:11086]
Gene Synonyms
SLIL3, Slit-2
Location
Chromosome 4: 20,254,883-20,622,184 forward strand.
GRCh37:CM000666.1
About this gene
This gene has 11 transcripts (splice variants), 194 orthologues and 25 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000504154.1 | SLIT2-001 | 6390 | 1529aa | ENSP00000422591.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3426 | B3KNE2 O94813 Q4W5K2 Q4W5N0 | NM_004787.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000503823.1 | SLIT2-002 | 5233 | 1521aa | ENSP00000427548.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KNE2 O94813 Q4W5K2 Q4W5N0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000273739.5 | SLIT2-004 | 5132 | 1542aa | ENSP00000273739.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KNE2 Q4W5K2 Q4W5N0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000503837.1 | SLIT2-003 | 4752 | 1525aa | ENSP00000422261.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KNE2 O94813 Q4W5K2 Q4W5N0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000511508.1 | SLIT2-012 | 767 | 212aa | ENSP00000421975.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H0U4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000509941.1 | SLIT2-010 | 739 | 196aa | ENSP00000425609.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000508824.1 | SLIT2-006 | 532 | 146aa | ENSP00000426356.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PCX4 Q4W5N0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000512993.1 | SLIT2-011 | 394 | 82aa | ENSP00000423179.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000509394.2 | SLIT2-009 | 712 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000508541.1 | SLIT2-005 | 2947 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000509099.1 | SLIT2-008 | 443 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |