Gene: HAVCR2 ENSG00000135077

Description

hepatitis A virus cellular receptor 2 [Source:HGNC Symbol;Acc:18437]

Gene Synonyms

FLJ14428, HAVcr-2, KIM-3, TIM3, TIMD-3, TIMD3, Tim-3

Location

Chromosome 5: 156,512,843-156,569,880 reverse strand.

GRCh37:CM000667.1

About this gene

This gene has 6 transcripts (splice variants), 98 orthologues, 3 paralogues and is associated with 1 phenotype.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307851.4	HAVCR2-001	2907	301aa	ENSP00000312002.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4333	E5RFR4 Q8TDQ0	NM_032782.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000522593.1	HAVCR2-004	975	273aa	ENSP00000430873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHN3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000524219.1	HAVCR2-007	566	74aa	ENSP00000430328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFR4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000517358.1	HAVCR2-005	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522902.1	HAVCR2-002	1010	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000521665.1	HAVCR2-006	795	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Gene tree

As of the latest update in March 2020 we are not supporting data for species other than human on this GRCh37 site and the view you wish to use is disabled.

You can read more about why we have done this on our blog.

You can still view this page on the following archive resources:

1. The Ensembl 75 archive represents a code and data freeze taken in February 2014.

2. The GRCh37 archive represents a code and data freeze taken in January 2019.

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Gene: HAVCR2 ENSG00000135077

Gene tree