protein tyrosine phosphatase, non-receptor type 6 [Source:HGNC Symbol;Acc:9658]
HCP, HCPH, HPTP1C, PTP-1C, PTP1C, SH-PTP1, SHP-1, SHP-1L, SHP1
Chromosome 12: 7,055,631-7,070,479 forward strand.
GRCh37:CM000674.1
View alleles of this gene on alternative sequences
This gene has 24 transcripts (splice variants), 1 gene allele, 13 paralogues and is associated with 48 phenotypes.
- Transcript ID
- Name
- bp
- Protein
- Translation ID
- Biotype
- CCDS
- UniProt Match
- RefSeq
- Flags
Transcript ID | Name | bp | Protein | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|
ENST00000456013.1 | PTPN6-202 | 2389 | 624aa | Protein coding | CCDS44821 | F5H0N8 P29350 | NM_080549.3 | Ensembl Canonical, GENCODE Basic, |
ENST00000318974.9 | PTPN6-008 | 2245 | 595aa | Protein coding | CCDS44820 | F5H0N8 P29350 | NM_002831.5 | GENCODE Basic, |
ENST00000399448.1 | PTPN6-001 | 2159 | 597aa | Protein coding | CCDS41744 | P29350 Q53XS4 | NM_080548.4 | GENCODE Basic, |
ENST00000447931.2 | PTPN6-201 | 1971 | 556aa | Protein coding | P29350 | - | GENCODE Basic, | |
ENST00000543115.1 | PTPN6-018 | 650 | 130aa | Protein coding | F5H5H9 | - | CDS 3' incomplete, | |
ENST00000541698.1 | PTPN6-023 | 592 | 150aa | Protein coding | F5H1Z8 | - | CDS 3' incomplete, | |
ENST00000538715.1 | PTPN6-014 | 579 | 165aa | Protein coding | F5H0N8 | - | CDS 3' incomplete, | |
ENST00000542462.1 | PTPN6-021 | 570 | 144aa | Protein coding | F5GY79 | - | CDS 3' incomplete, | |
ENST00000545153.1 | PTPN6-012 | 959 | 72aa | Nonsense mediated decay | U3KQS1 | - | - | |
ENST00000542848.1 | PTPN6-019 | 656 | 58aa | Nonsense mediated decay | F5H4Z1 | - | - | |
ENST00000536013.1 | PTPN6-013 | 602 | 56aa | Nonsense mediated decay | F5H1V7 | - | - | |
ENST00000535462.1 | PTPN6-016 | 543 | 60aa | Nonsense mediated decay | F5GXD4 | - | - | |
ENST00000539029.1 | PTPN6-004 | 705 | No protein | Processed transcript | - | - | - | |
ENST00000537533.1 | PTPN6-005 | 673 | No protein | Processed transcript | - | - | - | |
ENST00000542277.1 | PTPN6-007 | 664 | No protein | Processed transcript | - | - | - | |
ENST00000540740.1 | PTPN6-011 | 592 | No protein | Processed transcript | - | - | - | |
ENST00000543120.1 | PTPN6-010 | 564 | No protein | Processed transcript | - | - | - | |
ENST00000534900.1 | PTPN6-025 | 538 | No protein | Processed transcript | - | - | - | |
ENST00000416215.2 | PTPN6-003 | 2412 | No protein | Retained intron | - | - | - | |
ENST00000543744.1 | PTPN6-002 | 2043 | No protein | Retained intron | - | - | - | |
ENST00000539365.1 | PTPN6-022 | 907 | No protein | Retained intron | - | - | - | |
ENST00000542761.1 | PTPN6-006 | 795 | No protein | Retained intron | - | - | - | |
ENST00000538318.1 | PTPN6-024 | 759 | No protein | Retained intron | - | - | - | |
ENST00000536521.1 | PTPN6-015 | 513 | No protein | Retained intron | - | - | - |