Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FCRL6 ENSG00000181036

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Description

Fc receptor-like 6 [Source:HGNC Symbol;Acc:31910]

Gene Synonyms

FCRH6, FLJ16056, FcRH6, IFGP6

Location

Chromosome 1: 159,770,301-159,786,041 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 7 transcripts (splice variants) and 14 paralogues.

Transcripts

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Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368106.3	FCRL6-003	1306	434aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30912	Q6DN72	NM_001004310.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000321935.6	FCRL6-001	1997	413aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60312	Q6DN72	NM_001284217.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000339348.5	FCRL6-004	1422	397aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6DN72	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000392235.3	FCRL6-002	947	311aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6DN72	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000536257.1	FCRL6-007	560	158aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYB3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000540741.1	FCRL6-005	1226	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541729.1	FCRL6-006	714	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Paralogues

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Download paralogues

Type	Ancestral taxonomy	Ensembl identifier & gene name	Compare	Location	Percentage of the paralogous sequence matching the query sequenceTarget %id	Percentage of the query sequence matching the sequence of the paralogueQuery %id
Ancient paralogues	Last common ancestor with Ray-finned fishes (Neopterygii)Bony vertebrates (Euteleostomi)	ENSG00000143226 FCGR2A Fc fragment of IgG, low affinity IIa, receptor (CD32) [Source:HGNC Symbol;Acc:3616]	Alignment (protein) Alignment (cDNA)	1:161,475,220-161,493,803:1	13.00 %	9.00 %
Ancient paralogues	Last common ancestor with Ray-finned fishes (Neopterygii)Bony vertebrates (Euteleostomi)	ENSG00000162746 FCRLB Fc receptor-like B [Source:HGNC Symbol;Acc:26431]	Alignment (protein) Alignment (cDNA)	1:161,691,353-161,697,933:1	18.00 %	17.00 %
Ancient paralogues	Last common ancestor with Ray-finned fishes (Neopterygii)Bony vertebrates (Euteleostomi)	ENSG00000179639 FCER1A Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide [Source:HGNC Symbol;Acc:3609]	Alignment (protein) Alignment (cDNA)	1:159,259,504-159,278,014:1	17.00 %	10.00 %
Ancient paralogues	Last common ancestor with Ray-finned fishes (Neopterygii)Bony vertebrates (Euteleostomi)	ENSG00000150337 FCGR1A Fc fragment of IgG, high affinity Ia, receptor (CD64) [Source:HGNC Symbol;Acc:3613]	Alignment (protein) Alignment (cDNA)	1:149,754,227-149,764,074:1	22.00 %	19.00 %
Ancient paralogues	Last common ancestor with Ray-finned fishes (Neopterygii)Bony vertebrates (Euteleostomi)	ENSG00000203747 FCGR3A Fc fragment of IgG, low affinity IIIa, receptor (CD16a) [Source:HGNC Symbol;Acc:3619]	Alignment (protein) Alignment (cDNA)	1:161,511,549-161,600,917:-1	13.00 %	9.00 %
Ancient paralogues	Last common ancestor with Ray-finned fishes (Neopterygii)Bony vertebrates (Euteleostomi)	ENSG00000072694 FCGR2B Fc fragment of IgG, low affinity IIb, receptor (CD32) [Source:HGNC Symbol;Acc:3618]	Alignment (protein) Alignment (cDNA)	1:161,551,101-161,648,444:1	15.00 %	10.00 %
Ancient paralogues	Last common ancestor with Ray-finned fishes (Neopterygii)Bony vertebrates (Euteleostomi)	ENSG00000162747 FCGR3B Fc fragment of IgG, low affinity IIIb, receptor (CD16b) [Source:HGNC Symbol;Acc:3620]	Alignment (protein) Alignment (cDNA)	1:161,592,986-161,601,753:-1	14.00 %	9.00 %
Ancient paralogues	Last common ancestor with Ray-finned fishes (Neopterygii)Bony vertebrates (Euteleostomi)	ENSG00000198019 FCGR1B Fc fragment of IgG, high affinity Ib, receptor (CD64) [Source:HGNC Symbol;Acc:3614]	Alignment (protein) Alignment (cDNA)	1:120,926,979-120,935,937:-1	12.00 %	8.00 %
Genes (homologues) that have evolved by duplication.Paralogues	Last common ancestor with Marsupials (Marsupialia)Marsupials and Placental mammals (Theria)	ENSG00000132185 FCRLA Fc receptor-like A [Source:HGNC Symbol;Acc:18504]	Alignment (protein) Alignment (cDNA)	1:161,676,762-161,684,142:1	30.00 %	27.00 %
Genes (homologues) that have evolved by duplication.Paralogues	Last common ancestor with Platypus (Ornithorhynchus anatinus)Mammals (Mammalia)	ENSG00000160856 FCRL3 Fc receptor-like 3 [Source:HGNC Symbol;Acc:18506]	Alignment (protein) Alignment (cDNA)	1:157,644,111-157,670,647:-1	20.00 %	34.00 %
Genes (homologues) that have evolved by duplication.Paralogues	Last common ancestor with Platypus (Ornithorhynchus anatinus)Mammals (Mammalia)	ENSG00000132704 FCRL2 Fc receptor-like 2 [Source:HGNC Symbol;Acc:14875]	Alignment (protein) Alignment (cDNA)	1:157,715,523-157,746,922:-1	28.00 %	32.00 %
Genes (homologues) that have evolved by duplication.Paralogues	Last common ancestor with Platypus (Ornithorhynchus anatinus)Mammals (Mammalia)	ENSG00000163534 FCRL1 Fc receptor-like 1 [Source:HGNC Symbol;Acc:18509]	Alignment (protein) Alignment (cDNA)	1:157,764,193-157,789,895:-1	24.00 %	24.00 %
Genes (homologues) that have evolved by duplication.Paralogues	Last common ancestor with Platypus (Ornithorhynchus anatinus)Mammals (Mammalia)	ENSG00000143297 FCRL5 Fc receptor-like 5 [Source:HGNC Symbol;Acc:18508]	Alignment (protein) Alignment (cDNA)	1:157,483,167-157,522,310:-1	15.00 %	33.00 %
Genes (homologues) that have evolved by duplication.Paralogues	Last common ancestor with Platypus (Ornithorhynchus anatinus)Mammals (Mammalia)	ENSG00000163518 FCRL4 Fc receptor-like 4 [Source:HGNC Symbol;Acc:18507]	Alignment (protein) Alignment (cDNA)	1:157,543,539-157,567,870:-1	20.00 %	24.00 %

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