Gene: OLR1 ENSG00000173391

Description

oxidized low density lipoprotein (lectin-like) receptor 1 [Source:HGNC Symbol;Acc:8133]

Gene Synonyms

CLEC8A, LOX-1, LOX1, LOXIN, SCARE1, SLOX1

Location

Chromosome 12: 10,310,902-10,324,737 reverse strand.

GRCh37:CM000674.1

About this gene

This gene has 11 transcripts (splice variants) and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000309539.3	OLR1-001	2460	273aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8618	F5H001 F5H0N6 F5H3G7 F5H7N8 J3QTI8 P78380	NM_002543.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000545927.1	OLR1-008	1008	189aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53746	F5H001 F5H0N6 P78380	NM_001172633.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000432556.2	OLR1-002	950	181aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53745	B7ZAN8 P78380	NM_001172632.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000544577.1	OLR1-003	924	165aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZH1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000543993.1	OLR1-005	822	77aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZAN8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000539518.1	OLR1-007	732	214aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H001 F5H0N6 F5H3G7 F5H7N8 J3QTI8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000339968.6	OLR1-010	591	104aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0N6 J3QTI8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000538745.1	OLR1-009	583	123aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0N6 F5H3G7 J3QTI8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000538873.1	OLR1-013	516	57aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0N6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000543414.1	OLR1-006	466	104aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H001	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000536989.1	OLR1-014	569	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Genomic alignments

As of the latest update in March 2020 we are not supporting data for species other than human on this GRCh37 site and the view you wish to use is disabled.

You can read more about why we have done this on our blog.

You can still view this page on the following archive resources:

1. The Ensembl 75 archive represents a code and data freeze taken in February 2014.

2. The GRCh37 archive represents a code and data freeze taken in January 2019.

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Gene: OLR1 ENSG00000173391

Genomic alignments