Gene: TRNT1 ENSG00000072756

Description

tRNA nucleotidyl transferase, CCA-adding, 1 [Source:HGNC Symbol;Acc:17341]

Gene Synonyms

CCA1, CGI-47, MtCCA

Location

Chromosome 3: 3,168,600-3,192,563 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 11 transcripts (splice variants) and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000251607.6	TRNT1-001	2276	434aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2561	C9JRS7 Q96Q11	NM_182916.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000280591.6	TRNT1-004	2180	414aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRS7 Q96Q11	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000402675.1	TRNT1-002	1935	57aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96Q11	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000339437.6	TRNT1-003	976	57aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96Q11	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000420393.1	TRNT1-007	854	57aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96Q11	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000413000.1	TRNT1-008	483	62aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRS7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000434583.1	TRNT1-010	1871	434aa	Nonsense mediated decay	CCDS2561	C9JRS7 Q96Q11	-	-
ENST00000397779.2	TRNT1-011	374	65aa	Nonsense mediated decay		F8W8C3	-	-
ENST00000469632.1	TRNT1-009	867	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465998.1	TRNT1-006	520	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482311.1	TRNT1-012	447	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Comparative Genomics

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Gene: TRNT1 ENSG00000072756

Comparative Genomics