Gene: TNFRSF1A ENSG00000067182

Description

tumor necrosis factor receptor superfamily, member 1A [Source:HGNC Symbol;Acc:11916]

Gene Synonyms

CD120a, FPF, MS5, TBP1, TNF-R, TNF-R-I, TNF-R55, TNFAR, TNFR1, TNFR1-d2, TNFR55, TNFR60, p55, p55-R, p60

Location

Chromosome 12: 6,437,923-6,451,280 reverse strand.

GRCh37:CM000674.1

About this gene

This gene has 16 transcripts (splice variants), 1 paralogue and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000162749.2	TNFRSF1A-001	2223	455aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8542	F5H4T5 J9PH39 P19438	NM_001065.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000540022.1	TNFRSF1A-002	1527	412aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H061 J9PH39	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000366159.4	TNFRSF1A-004	1339	218aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H4T5 P19438	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000539372.1	TNFRSF1A-014	1063	298aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H4T5 F5H8A6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000440083.2	TNFRSF1A-013	1034	254aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H4T5 F5H6V7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000536194.1	TNFRSF1A-010	581	118aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6Z2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534885.1	TNFRSF1A-003	2069	122aa	Nonsense mediated decay		F5GWJ4	-	-
ENST00000543995.1	TNFRSF1A-005	1531	72aa	Nonsense mediated decay		F5H7N1	-	-
ENST00000543048.1	TNFRSF1A-011	571	71aa	Nonsense mediated decay		F5H4T5	-	-
ENST00000437813.3	TNFRSF1A-012	634	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000543359.1	TNFRSF1A-015	627	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000535038.1	TNFRSF1A-007	578	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000535958.1	TNFRSF1A-009	568	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000538363.1	TNFRSF1A-008	554	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000537842.1	TNFRSF1A-016	404	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536717.1	TNFRSF1A-006	1503	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Comparative Genomics

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Personal Data

Favourite species

All species

Recent locations

Gene: TNFRSF1A ENSG00000067182

Comparative Genomics