Transcript: ENST00000593991.1 CTC-429P9.4-003

Description

Small integral membrane protein 7; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:E9PNA8]

Location

Chromosome 19: 16,688,461-16,770,915 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 2 domains and features, is associated with 37093 variant alleles and maps to 215 oligo probes.

Gene

This transcript is a product of gene ENSG00000268790.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000593459.1	CTC-429P9.4-001	222	62aa	ENSP00000470086.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0QYU9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000600705.1	CTC-429P9.4-004	956	49aa	ENSP00000472877.1	Nonsense mediated decay	E9PNA8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000593991.1	CTC-429P9.4-003	548	73aa	ENSP00000472547.1	Nonsense mediated decay	M0R0R3 M0R2G5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000594509.1	CTC-429P9.4-005	479	73aa	ENSP00000471649.1	Nonsense mediated decay	M0R0R3 M0R2G5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000601636.1	CTC-429P9.4-007	437	63aa	ENSP00000472751.1	Nonsense mediated decay	M0R0R3	-	-
ENST00000595505.1	CTC-429P9.4-006	400	49aa	ENSP00000470469.1	Nonsense mediated decay	E9PNA8	-	-
ENST00000593962.1	CTC-429P9.4-002	468	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-

Summary

Statistics

Exons: 8, Coding exons: 5, Transcript length: 548 bps, Translation length: 73 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000593991.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000462792 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000593991.1 CTC-429P9.4-003

Summary