Transcript: ENST00000592957.1 TXNL4A-004

Description

thioredoxin-like 4A [Source:HGNC Symbol;Acc:30551]

Gene Synonyms

DIB1, DIM1, HsT161, SNRNP15, TXNL4, U5-15kD

Location

Chromosome 18: 77,733,513-77,793,891 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 26457 variant alleles and maps to 229 oligo probes.

Gene

This transcript is a product of gene ENSG00000141759.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269601.5	TXNL4A-001	1448	142aa	ENSP00000269601.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32852	K7ESL1 P83876	NM_006701.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000585474.1	TXNL4A-002	1185	71aa	ENSP00000465572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ESL1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000588162.1	TXNL4A-010	752	57aa	ENSP00000465321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJU2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000591711.1	TXNL4A-007	669	103aa	ENSP00000468493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ES07	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000592837.1	TXNL4A-012	611	71aa	ENSP00000468761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ESL1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000592957.1	TXNL4A-004	546	71aa	ENSP00000465493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ESL1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000585769.1	TXNL4A-003	988	54aa	ENSP00000466266.1	Nonsense mediated decay		K7EPA6	-	-
ENST00000355491.5	TXNL4A-008	803	91aa	ENSP00000347678.4	Nonsense mediated decay		O14835	-	-
ENST00000586295.1	TXNL4A-005	706	86aa	ENSP00000466694.1	Nonsense mediated decay		K7EMX5	-	-
ENST00000586825.1	TXNL4A-009	586	54aa	ENSP00000467304.1	Nonsense mediated decay		K7EPA6	-	-
ENST00000589926.1	TXNL4A-006	535	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000586612.1	TXNL4A-011	448	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 546 bps, Translation length: 71 residues

Version

ENST00000592957.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000451039 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000592957.1 TXNL4A-004

Summary