Transcript: ENST00000591578.1 CCDC106-003

Description

coiled-coil domain containing 106 [Source:HGNC Symbol;Acc:30181]

Gene Synonyms

HSU79303, ZNF581

Location

Chromosome 19: 56,159,599-56,164,527 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 3256 variant alleles and maps to 424 oligo probes.

Gene

This transcript is a product of gene ENSG00000173581.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000586790.1	CCDC106-002	2162	280aa	ENSP00000465757.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33118	K7EMP7 K7ER22 K7ES29 Q9BWC9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000591578.1	CCDC106-003	1592	280aa	ENSP00000466870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33118	K7EMP7 K7ER22 K7ES29 Q9BWC9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000308964.3	CCDC106-001	1546	280aa	ENSP00000309681.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33118	K7EMP7 K7ER22 K7ES29 Q9BWC9	NM_013301.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000588740.1	CCDC106-004	1404	280aa	ENSP00000468539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33118	K7EMP7 K7ER22 K7ES29 Q9BWC9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000591241.1	CCDC106-008	1153	245aa	ENSP00000466521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMI9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000592996.1	CCDC106-009	741	172aa	ENSP00000466597.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMP7 K7ER22 K7ES29	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587213.1	CCDC106-007	626	39aa	ENSP00000468077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ER22	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000593069.1	CCDC106-006	552	45aa	ENSP00000468521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ER22 K7ES29	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586864.1	CCDC106-005	751	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,592 bps, Translation length: 280 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BWC9

CCDS

This transcript is a member of the Human CCDS set: CCDS33118

Version

ENST00000591578.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000453594 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000591578.1 CCDC106-003

Summary