Transcript: ENST00000590151.1 ACLY-003

Description

ATP citrate lyase [Source:HGNC Symbol;Acc:115]

Gene Synonyms

ACL, ATPCL, CLATP

Location

Chromosome 17: 40,023,170-40,075,215 reverse strand.

About this transcript

This transcript has 29 exons, is annotated with 23 domains and features, is associated with 23992 variant alleles and maps to 757 oligo probes.

Gene

This transcript is a product of gene ENSG00000131473.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000352035.2	ACLY-001	4339	1101aa	ENSP00000253792.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11412	K7EIE7 K7ESG8 P53396 Q4LE36	NM_001096.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000353196.1	ACLY-201	4318	1091aa	ENSP00000345398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11413	K7EIE7 K7ESG8 P53396 Q8N9C4	NM_198830.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000590151.1	ACLY-003	4309	1101aa	ENSP00000466259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11412	K7EIE7 K7ESG8 P53396 Q4LE36	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000393896.2	ACLY-002	3682	1091aa	ENSP00000377474.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11413	K7EIE7 K7ESG8 P53396 Q8N9C4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000537919.1	ACLY-004	2974	830aa	ENSP00000445349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E3P0 Q8N9C4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000590770.1	ACLY-006	583	133aa	ENSP00000464717.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EIE7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000592970.1	ACLY-005	540	109aa	ENSP00000468705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ESG8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000588779.1	ACLY-009	783	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000590735.1	ACLY-007	586	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000588547.1	ACLY-008	471	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 29, Coding exons: 28, Transcript length: 4,309 bps, Translation length: 1,101 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P53396

CCDS

This transcript is a member of the Human CCDS set: CCDS11412

Version

ENST00000590151.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000449109 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000590151.1 ACLY-003

Summary