Transcript: ENST00000585132.1 NCOA4-003

Description

nuclear receptor coactivator 4 [Source:HGNC Symbol;Acc:7671]

Gene Synonyms

ARA70, DKFZp762E1112, ELE1, PTC3, RFG

Location

Chromosome HG1211_PATCH: 46,500,538-46,518,903 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 6 domains and features, is associated with 8685 variant alleles and maps to 509 oligo probes.

Gene

This transcript is a product of gene ENSG00000266412.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000578454.1	NCOA4-206	3735	650aa	ENSP00000463027.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q13772	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000579039.1	NCOA4-207	3646	630aa	ENSP00000463455.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4DZ85 Q13772	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000583565.1	NCOA4-209	3575	614aa	ENSP00000463476.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4DZ85 Q13772	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000585132.1	NCOA4-003	3487	614aa	ENSP00000464054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4DZ85 Q13772	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000581486.1	NCOA4-001	3431	614aa	ENSP00000462943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4DZ85 Q13772	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000577819.1	NCOA4-002	3293	575aa	ENSP00000464035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TAR0 Q8NI67 Q96E88	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000585056.1	NCOA4-210	2124	514aa	ENSP00000463022.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4DF87 B4DZ85	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000580070.1	NCOA4-208	1755	448aa	ENSP00000462352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4DZ85	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000578680.1	NCOA4-004	792	264aa	ENSP00000462014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000581981.1	NCOA4-005	867	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 3,487 bps, Translation length: 614 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13772

Version

ENST00000585132.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article. This was projected to the alternate locus via a mapping from the primary assembly.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000048052 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000585132.1 NCOA4-003

Summary