Transcript: ENST00000579649.1 RPL36-006

Description

ribosomal protein L36 [Source:HGNC Symbol;Acc:13631]

Gene Synonyms

DKFZp566B023, L36

Location

Chromosome 19: 5,674,958-5,691,678 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 9145 variant alleles and maps to 240 oligo probes.

Gene

This transcript is a product of gene ENSG00000130255.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000577222.1	RPL36-001	874	105aa	ENSP00000464342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12147	Q9BYF3 Q9Y3U8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000347512.3	RPL36-003	707	105aa	ENSP00000252543.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12147	Q9BYF3 Q9Y3U8	NM_033643.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000394580.2	RPL36-004	556	105aa	ENSP00000378081.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12147	Q9BYF3 Q9Y3U8	NM_015414.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000579446.1	RPL36-007	452	94aa	ENSP00000464613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QSB5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000579649.1	RPL36-006	449	105aa	ENSP00000462609.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12147	Q9BYF3 Q9Y3U8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000582463.1	RPL36-005	239	68aa	ENSP00000462927.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTD3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000582380.2	RPL36-002	542	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000590786.1	RPL36-008	907	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 449 bps, Translation length: 105 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y3U8

CCDS

This transcript is a member of the Human CCDS set: CCDS12147

Version

ENST00000579649.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000442559 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000579649.1 RPL36-006

Summary