Transcript: ENST00000574297.1 SCIMP-004

Description

SLP adaptor and CSK interacting membrane protein [Source:HGNC Symbol;Acc:33504]

Gene Synonyms

C17orf87, DTFT5783, FLJ32580, MGC163426, MGC163428, SCIMP, UNQ5783

Location

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 10033 variant alleles and maps to 117 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000574081.1	SCIMP-001	2383	145aa	ENSP00000461269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42242	Q6UWF3	NM_207103.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000571800.1	SCIMP-002	2155	123aa	ENSP00000459605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6UWF3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000399600.4	SCIMP-003	1173	138aa	ENSP00000382509.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62044	A6XGL4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000574297.1	SCIMP-004	569	130aa	ENSP00000459153.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1W2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 569 bps, Translation length: 130 residues

Version

ENST00000574297.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000439002 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.