Transcript: ENST00000569170.1 RP11-166N6.3-001

Location

About this transcript

This transcript has 11 exons, is annotated with 3 domains and features, is associated with 24779 variant alleles and maps to 406 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq	Flags
ENST00000569170.1	RP11-166N6.3-001	1189	72aa	ENSP00000457784.1	Nonsense mediated decay	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000562308.1	RP11-166N6.3-002	693	49aa	ENSP00000457487.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000565169.1	RP11-166N6.3-003	495	68aa	ENSP00000455583.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 2, Transcript length: 1,189 bps, Translation length: 72 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000569170.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000430534 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.