Transcript: ENST00000552442.1 UBE2N-003

Description

ubiquitin-conjugating enzyme E2N [Source:HGNC Symbol;Acc:12492]

Gene Synonyms

BLU, HEL-S-71, MGC8489, UBC13, UbcH-ben, UbcH13

Location

Chromosome 12: 93,803,577-93,835,711 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 14008 variant alleles and maps to 266 oligo probes.

Gene

This transcript is a product of gene ENSG00000177889.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318066.2	UBE2N-001	3671	152aa	ENSP00000316176.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31875	F8VQQ8 P61088	NM_003348.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000550657.1	UBE2N-004	3018	152aa	ENSP00000449352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VV71	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000549833.1	UBE2N-002	960	89aa	ENSP00000450260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VQQ8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000552442.1	UBE2N-003	607	105aa	ENSP00000448352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VSD4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000549490.1	UBE2N-005	676	87aa	ENSP00000447009.1	Nonsense mediated decay		F8VZ29	-	-
ENST00000548946.1	UBE2N-006	492	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 607 bps, Translation length: 105 residues

Version

ENST00000552442.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000407714 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000552442.1 UBE2N-003

Summary